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RiskStratifiedEstimation R package

Software Packagevalidated✓ Source-grounded

This tool helps researchers see if a treatment works differently for patients based on their individual risk levels. It uses real-world health data to compare how well treatments work across different patient groups.

At a glance

Use when

Assessing how treatment effects vary by patient risk level in real-world data; conducting comparative effectiveness research across diverse populations; validating findings in multiple databases

Avoid when

Data quality is poor or OMOP mapping is incomplete; outcome prediction model performs poorly; unmeasured confounding is suspected to be substantial

Inputs

Observational health data in OMOP Common Data Model format; definitions for treatment, comparator, and outcome cohorts; prediction models for outcomes and propensity scores

Outputs

Stratified estimates of relative and absolute treatment effects; diagnostic plots for model calibration, ROC curves, propensity score distributions, and covariate balance

How it works

An R package for evaluating treatment effect heterogeneity using a risk-based approach in observational databases structured under the OMOP Common Data Model. It integrates functionality from PatientLevelPrediction and CohortMethod packages, enabling risk stratification through prediction modeling, propensity score adjustment, and estimation of relative and absolute treatment effects across risk strata. The framework supports large-scale regularized regression, diagnostics for model performance, and visualization of results across multiple databases.

Project
EHDEN
Funding
IMI
Project status
Completed 2024
HTA domains
Clinical Effectiveness
Technology
Non-specific
Assumptions
Treatment effects can be meaningfully stratified by predicted baseline risk; sufficient data exists to build reliable prediction models; confounding can be adjusted for using observed covariates and propensity scores
Strengths
Enables assessment of treatment effect heterogeneity across risk strata; leverages standardized OMOP CDM data for generalizability; integrates comprehensive diagnostics for prediction and estimation steps; supports multi-database analysis
Limitations
Relies on quality of observational data and correct model specification; risk stratification depends on predictive performance of the outcome model; does not account for unmeasured confounding
Also known as
RiskStratifiedEstimation

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